Start exploring the data by using the text-box on this page to look up perturbagens of interest in Touchstone. To see the suite of tools, including apps to query your gene expression signatures and analyze resulting connections, click on Tools in the menu bar.
Support + Office hours canceled
As of 7/15/22, our team will no longer be offering office hours and email support for clue.io and its app. Our extensive online learning resources will still be available through Connectopedia,
including the comprehensive CLUE glossary. Please note that this will not affect any functionalities on clue.io and its apps--we are only ending individualized support. As always, we appreciate your
continued use of clue.io! —The CLUE Team
Data and Tools
We are excited to announce the release of the updated CMap LINCS gene expression resource.
This release is an expansion upon the previous 2017 data release and contains >3M gene expression profiles and >1M replicate-collapsed signatures.
In addition, we provide the following tools to help facilitate data access and use:
- Code libraries for accessing and analyzing  CMap data
- Notebooks that illustrate common modes of  data access and analysis
- Docker containers for running common  analysis algorithms
Please note that these data and tools are released as a beta version and will likely be subject to change as minor updates are made.